As the famous books say, reasembly is the reverse of disasembly, most of the time. Guess you have a clutch alignment tool, if not, get/borrow one, or it can be a bitch to get it mated to the 'box.
Check the water pump gasket & bearing seal for signs of leaks, and replace accordingly, + check the correct 'stat is fitted... Don't want another cooking incident I suspect?
Personally, unless you *know* the thing is a good'un, I'd test run the "new" engine out of the car, not difficult, bolted to a pallet or something, with temporary ancillary hookup (water pump only on an emergency belt.) With all the correct fluids in the system of course, only for a few minutes to make sure it's all OK.
Did that for a friend a little while back (a 200TDi from eBlag) Made a nice noise with no pipe!... His Mrs thought we were mad, probably right. It started first turn (when we got a decent battery on the job!) And sounded "nice and even". Didn't vibrate its way across the floor either.
MotorsForum website is not affiliated with any of the manufacturers or service providers discussed here.
All logos and trade names are the property of their respective owners.